Publications

Jeffrey W. Doser, Marc Kéry, Andrew O. Finley, Sarah P. Saunders, Aaron S. Weed, Elise F. Zipkin (2023). Guidelines for the use of spatially-varying coefficients in species distribution models.

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Jeffrey W. Doser, Andrew O. Finley, Sudipto Banerjee (2022). Joint species distribution models with imperfect detection for high-dimensional spatial data.

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Jeffrey W. Doser, Andrew O. Finley, Marc Kéry, Elise F. Zipkin (2022). spOccupancy: An R package for fitting single-species, multi-species, and integrated spatial occupancy models. In: Methods in Ecology and Evolution (2022) https://doi.org/10.1111/2041-210X.13897.

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Jeffrey W. Doser, Wendy Leuenberger, T. Scott Sillett, Michael T. Hallworth, Elise F. Zipkin (2022). Integrated community occupancy models: A framework to assess occurrence and biodiversity dynamics using multiple data sources. In: Methods in Ecology and Evolution (2022) https://doi.org/10.1111/2041-210X.13811.

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Jeffrey W. Doser, Andrew O. Finley, Aaron S. Weed, Elise F. Zipkin (2021). Integrating automated acoustic vocalization data and point count surveys for estimation of bird abundance. In: Methods in Ecology and Evolution (2021) https://doi.org/10.1111/2041-210X.13578.

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Jeffrey W. Doser, Aaron S. Weed, Elise F. Zipkin, Kathryn M. Miller, Andrew O. Finley (2021). Trends in bird abundance differ among protected forests but not bird guilds. In Ecological Applications: https://doi.org/10.1002/eap.2377.

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Mahdi Teimouri, Jeffrey W. Doser, Andrew O. Finley (2020). ForestFit: An R package for modeling plant size distributions. In: Environmental Modelling & Software (2020) https://doi.org/10.1016/j.envsoft.2020.104668.

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Jeffrey W. Doser, Andrew O. Finley, Eric P. Kasten, Stuart H. Gage (2020). Assessing soundscape disturbance through hierarchical models and acoustic indices: A case study on a shelterwood logged northern Michigan forest. In: Ecological Indicators (2020) https://doi.org/10.1016/j.ecolind.2020.106244.

PDF Code Dataset arXiv

Jeffrey W. Doser, Kristina M. Hannam, Andrew O. Finley (2020). Characterizing functional relationships between anthropogenic and biological sounds: A western New York state soundscape case study. In: Landscape Ecology (2020) https://doi.org/10.1007/s10980-020-00973-2.